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Volume 91, Issue 2 e01447
Article

A critical comparison of integral projection and matrix projection models for demographic analysis

Daniel F. Doak

Corresponding Author

Daniel F. Doak

Environmental Studies Program, University of Colorado, Boulder, Colorado, USA

E-mail: [email protected]

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Ellen Waddle

Ellen Waddle

Environmental Studies Program and Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, USA

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Ryan E. Langendorf

Ryan E. Langendorf

Cooperative Institute for Research in Environmental Sciences and Environmental Studies Program, University of Colorado, Boulder, Colorado, USA

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Allison M. Louthan

Allison M. Louthan

Division of Biology, Kansas State University, Manhattan, Kansas, USA

KS and Biology Department, Duke University, Durham, North Carolina, USA

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Nathalie Isabelle Chardon

Nathalie Isabelle Chardon

WSL Institute for Snow and Avalanche Research SLF, Flüelastrasse 11, Davos Dorf, Switzerland

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Reilly R. Dibner

Reilly R. Dibner

Department of Zoology and Physiology, University of Wyoming, Laramie, Wyoming, USA

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Douglas A. Keinath

Douglas A. Keinath

Department of Zoology and Physiology, University of Wyoming, Laramie, Wyoming, USA

Wyoming Ecological Services Field Office, United States Fish and Wildlife Service, 5353 Yellowstone Road, Suite 308A, Cheyenne, Wyoming, 82009 USA

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Elizabeth Lombardi

Elizabeth Lombardi

Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, New York, USA

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Christopher Steenbock

Christopher Steenbock

Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, USA

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Robert K. Shriver

Robert K. Shriver

Department of Natural Resources and Environmental Science, University of Nevada, Reno, Nevada, USA

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Cristina Linares

Cristina Linares

Department of Evolutionary Biology, Ecology and Environmental Sciences, Institut de Recerca de la Biodiversitat (IRBio), University of Barcelona, Avenida Diagonal 643, Barcelona, 08028 Spain

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Maria Begoña Garcia

Maria Begoña Garcia

Department of Evolutionary Biology, Ecology, Pyrenean Institute of Ecology (CSIC), Avenida Montañana 1005, Zaragoza, 50059 Spain

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W. Chris Funk

W. Chris Funk

Department of Biology, Graduate Degree Program in Ecology, Colorado State University, Fort Collins, Colorado, USA

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Sarah W. Fitzpatrick

Sarah W. Fitzpatrick

W.K. Kellogg Biological Station, Michigan State University, Hickory Corners, Michigan, USA

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William F. Morris

William F. Morris

Department of Biology, Duke University, Durham, North Carolina, USA

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Megan L. DeMarche

Megan L. DeMarche

Plant Biology Department, University of Georgia, Athens, Georgia, USA

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First published: 18 January 2021
Citations: 16

Corresponding Editor: Bruce E. Kendall.

Abstract

Structured demographic models are among the most common and useful tools in population biology. However, the introduction of integral projection models (IPMs) has caused a profound shift in the way many demographic models are conceptualized. Some researchers have argued that IPMs, by explicitly representing demographic processes as continuous functions of state variables such as size, are more statistically efficient, biologically realistic, and accurate than classic matrix projection models, calling into question the usefulness of the many studies based on matrix models. Here, we evaluate how IPMs and matrix models differ, as well as the extent to which these differences matter for estimation of key model outputs, including population growth rates, sensitivity patterns, and life spans. First, we detail the steps in constructing and using each type of model. Second, we present a review of published demographic models, concentrating on size-based studies, which shows significant overlap in the way IPMs and matrix models are constructed and analyzed. Third, to assess the impact of various modeling decisions on demographic predictions, we ran a series of simulations based on size-based demographic data sets for five biologically diverse species. We found little evidence that discrete vital rate estimation is less accurate than continuous functions across a wide range of sample sizes or size classes (equivalently bin numbers or mesh points). Most model outputs quickly converged with modest class numbers (≥10), regardless of most other modeling decisions. Another surprising result was that the most commonly used method to discretize growth rates for IPM analyses can introduce substantial error into model outputs. Finally, we show that empirical sample sizes generally matter more than modeling approach for the accuracy of demographic outputs. Based on these results, we provide specific recommendations to those constructing and evaluating structured population models. Both our literature review and simulations question the treatment of IPMs as a clearly distinct modeling approach or one that is inherently more accurate than classic matrix models. Importantly, this suggests that matrix models, representing the vast majority of past demographic analyses available for comparative and conservation work, continue to be useful and important sources of demographic information.

Data Availability

Example R scripts and data files showing the routines used in our analyses are included in Data S2.