RANK CLOCKS AND PLANT COMMUNITY DYNAMICS
Corresponding Editor: F. He.
Abstract
Summarizing complex temporal dynamics in communities is difficult to achieve in a way that yields an intuitive picture of change. Rank clocks and rank abundance statistics provide a graphical and analytical framework for displaying and quantifying community dynamics. We used rank clocks, in which the rank order abundance for each species is plotted over time in temporal clockwise direction, to display temporal changes in species abundances and richness. We used mean rank shift and proportional species persistence to quantify changes in community structure in long‐term data sets from fertilized and control plots in a late successional old field, frequently and infrequently burned tallgrass prairie, and Chihuahuan desert grassland and shrubland communities. Rank clocks showed that relatively constant species richness masks considerable temporal dynamics in relative species abundances. In the old field, fertilized plots initially experienced high mean rank shifts that stabilized rapidly below that of unfertilized plots. Rank shifts were higher in infrequently burned vs. annually burned tallgrass prairie and in desert grassland compared to shrubland vegetation. Proportional persistence showed that arid grasslands were more dynamic than mesic grasslands. We conclude that rank clocks and rank abundance statistics provide important insights into community dynamics that are often hidden by traditional univariate approaches.
Citing Literature
Number of times cited according to CrossRef: 40
- Mitchell A. Johnsen, Blake R. Stuparyk, Jenna Cook, Rolf D. Vinebrooke, Resilience of pond communities to extreme thermal regime shifts: an alpine–montane reciprocal transplant experiment, Aquatic Sciences, 10.1007/s00027-020-0709-1, 82, 2, (2020).
- Heather J. Hannusch, William E. Rogers, Alexandra G. Lodge, Heath D. Starns, Douglas R. Tolleson, Semi‐arid savanna herbaceous production and diversity responses to interactive effects of drought, nitrogen deposition, and fire, Journal of Vegetation Science, 10.1111/jvs.12848, 31, 2, (255-265), (2020).
- R. M. B. Harris, F. Loeffler, A. Rumm, C. Fischer, P. Horchler, M. Scholz, F. Foeckler, K. Henle, Biological responses to extreme weather events are detectable but difficult to formally attribute to anthropogenic climate change, Scientific Reports, 10.1038/s41598-020-70901-6, 10, 1, (2020).
- Linhao Wu, Fangliang He, John R. Spence, Recovery of a boreal ground‐beetle (Coleoptera: Carabidae) fauna 15 years after variable retention harvest, Journal of Applied Ecology, 10.1111/1365-2664.13687, 57, 9, (1717-1729), (2020).
- Scott L. Collins, Y. Anny Chung, Lauren E. Baur, Alesia Hallmark, Timothy J. Ohlert, Jennifer A. Rudgers, Press–pulse interactions and long‐term community dynamics in a Chihuahuan Desert grassland, Journal of Vegetation Science, 10.1111/jvs.12881, 31, 5, (722-732), (2020).
- Rachel J. Clausing, Nicole E. Phillips, Peggy Fong, Environmental context shapes the long‐term role of nutrients in driving producer community trajectories in a top–down dominated marine ecosystem, Journal of Ecology, 10.1111/1365-2745.13405, 0, 0, (2020).
- Inês Silva, Ricardo Rocha, Adrià López-Baucells, Fábio Z. Farneda, Christoph F. J. Meyer, Effects of Forest Fragmentation on the Vertical Stratification of Neotropical Bats, Diversity, 10.3390/d12020067, 12, 2, (67), (2020).
- Taofeek O. Muraina, Frameworks on Patterns of Grasslands’ Sensitivity to Forecast Extreme Drought, Sustainability, 10.3390/su12197837, 12, 19, (7837), (2020).
- Anne E. Magurran, Maria Dornelas, Faye Moyes, Peter A. Henderson, Temporal β diversity—A macroecological perspective, Global Ecology and Biogeography, 10.1111/geb.13026, 28, 12, (1949-1960), (2019).
- Anna Törnroos, Laurene Pecuchet, Jens Olsson, Anna Gårdmark, Mats Blomqvist, Martin Lindegren, Erik Bonsdorff, Four decades of functional community change reveals gradual trends and low interlinkage across trophic groups in a large marine ecosystem, Global Change Biology, 10.1111/gcb.14552, 25, 4, (1235-1246), (2019).
- J. Bastow Wilson, Andrew D. Q. Agnew, Stephen H. Roxburgh, , The Nature of Plant Communities, 10.1017/9781108612265, (2019).
- Meghan L. Avolio, Ian T. Carroll, Scott L. Collins, Gregory R. Houseman, Lauren M. Hallett, Forest Isbell, Sally E. Koerner, Kimberly J. Komatsu, Melinda D. Smith, Kevin R. Wilcox, A comprehensive approach to analyzing community dynamics using rank abundance curves, Ecosphere, 10.1002/ecs2.2881, 10, 10, (2019).
- Yaozhan Xu, Dan Wan, Zhiqiang Xiao, Hao Wu, Mingxi Jiang, Spatio-temporal dynamics of seedling communities are determined by seed input and habitat filtering in a subtropical montane forest, Forest Ecology and Management, 10.1016/j.foreco.2019.117475, 449, (117475), (2019).
- Tian-tong Luo, Lise Heier, Zaki Ahmad Khan, Faraz Hasan, Trond Reitan, Abdool S. Yasseen, Zi-xuan Xie, Jian-long Zhu, Gabriel Yedid, Examining Community Stability in the Face of Mass Extinction in Communities of Digital Organisms, Artificial Life, 10.1162/artl_a_00272, (1-27), (2019).
- M R Araujo, K Uramoto, E N L Ferreira, W Mesquita Filho, J M M Walder, M Savaris, R A Zucchi, Fruit Fly (Diptera: Tephritidae) Diversity and Host Relationships in Diverse Environments Estimated with Two Sampling Methods, Environmental Entomology, 10.1093/ee/nvy177, (2018).
- Francisco A. López-Núñez, Sérgio Ribeiro, Hélia Marchante, Ruben H. Heleno, Elizabete Marchante, Life inside a gall: diversity, phenology and structure of Portuguese gall communities, their hosts, parasitoids and inquilines, Arthropod-Plant Interactions, 10.1007/s11829-018-9655-4, (2018).
- Fan Li, Steven C. Pennings, Response and Recovery of Low-Salinity Marsh Plant Communities to Presses and Pulses of Elevated Salinity, Estuaries and Coasts, 10.1007/s12237-018-00490-1, (2018).
- David A. Donoso, Tropical ant communities are in long-term equilibrium, Ecological Indicators, 10.1016/j.ecolind.2017.03.022, 83, (515-523), (2017).
- Meghna Agarwala, Ruth S. DeFries, Qamar Qureshi, Yadvendradev V. Jhala, Changes in the dry tropical forests in Central India with human use, Regional Environmental Change, 10.1007/s10113-015-0903-1, 16, S1, (5-15), (2016).
- Lauren M. Hallett, Sydney K. Jones, A. Andrew M. MacDonald, Matthew B. Jones, Dan F. B. Flynn, Julie Ripplinger, Peter Slaughter, Corinna Gries, Scott L. Collins, codyn: An r package of community dynamics metrics, Methods in Ecology and Evolution, 10.1111/2041-210X.12569, 7, 10, (1146-1151), (2016).
- Sydney K. Jones, Scott L. Collins, John M. Blair, Melinda D. Smith, Alan K. Knapp, Altered rainfall patterns increase forb abundance and richness in native tallgrass prairie, Scientific Reports, 10.1038/srep20120, 6, 1, (2016).
- Melinda D. Smith, Kimberly J. La Pierre, Scott L. Collins, Alan K. Knapp, Katherine L. Gross, John E. Barrett, Serita D. Frey, Laura Gough, Robert J. Miller, James T. Morris, Lindsey E. Rustad, John Yarie, Global environmental change and the nature of aboveground net primary productivity responses: insights from long-term experiments, Oecologia, 10.1007/s00442-015-3230-9, 177, 4, (935-947), (2015).
- Scott L. Collins, Yang Xia, Long-Term Dynamics and Hotspots of Change in a Desert Grassland Plant Community, The American Naturalist, 10.1086/679315, 185, 2, (E30-E43), (2015).
- Tibor Erős, Péter Takács, István Czeglédi, Péter Sály, András Specziár, Taxonomic- and trait-based recolonization dynamics of a riverine fish assemblage following a large-scale human-mediated disturbance: the red mud disaster in Hungary, Hydrobiologia, 10.1007/s10750-015-2262-9, 758, 1, (31-45), (2015).
- Meghan L. Avolio, Kimberly J. La Pierre, Gregory R. Houseman, Sally E. Koerner, Emily Grman, Forest Isbell, David Samuel Johnson, Kevin R. Wilcox, A framework for quantifying the magnitude and variability of community responses to global change drivers, Ecosphere, 10.1890/ES15-00317.1, 6, 12, (1-14), (2015).
- Jeremy J. Cusack, Amy J. Dickman, J. Marcus Rowcliffe, Chris Carbone, David W. Macdonald, Tim Coulson, Random versus Game Trail-Based Camera Trap Placement Strategy for Monitoring Terrestrial Mammal Communities, PLOS ONE, 10.1371/journal.pone.0126373, 10, 5, (e0126373), (2015).
- F. Isbell, P. B. Reich, D. Tilman, S. E. Hobbie, S. Polasky, S. Binder, Nutrient enrichment, biodiversity loss, and consequent declines in ecosystem productivity, Proceedings of the National Academy of Sciences, 10.1073/pnas.1310880110, 110, 29, (11911-11916), (2013).
- Timothy L. Dickson, Katherine L. Gross, Plant community responses to long-term fertilization: changes in functional group abundance drive changes in species richness, Oecologia, 10.1007/s00442-013-2722-8, 173, 4, (1513-1520), (2013).
- Clifford L.K. Robinson, Jennifer Yakimishyn, The persistence and stability of fish assemblages within eelgrass meadows ( Zostera marina ) on the Pacific coast of Canada , Canadian Journal of Fisheries and Aquatic Sciences, 10.1139/cjfas-2012-0339, 70, 5, (775-784), (2013).
- Elsa E. Cleland, Scott L. Collins, Timothy L. Dickson, Emily C. Farrer, Katherine L. Gross, Laureano A. Gherardi, Lauren M. Hallett, Richard J. Hobbs, Joanna S. Hsu, Laura Turnbull, Katharine N. Suding, Sensitivity of grassland plant community composition to spatial vs. temporal variation in precipitation, Ecology, 10.1890/12-1006.1, 94, 8, (1687-1696), (2013).
- Curtis J. Richardson, Ryan S. King, A Primer on Sampling Plant Communities in Wetlands, Methods in Biogeochemistry of Wetlands, undefined, (197-223), (2013).
- Xingjian Liu, F. Benjamin Zhan, Productivity of Doctoral Graduate Placement Among PhD-Granting Geography Programs in the United States: 1960–2010, The Professional Geographer, 10.1080/00330124.2011.603658, 64, 4, (475-490), (2012).
- János Izsák, Sandrine Pavoine, Links between the species abundance distribution and the shape of the corresponding rank abundance curve, Ecological Indicators, 10.1016/j.ecolind.2011.06.030, 14, 1, (1-6), (2012).
- Laura Gough, Katherine L. Gross, Elsa E. Cleland, Christopher M. Clark, Scott L. Collins, Joseph E. Fargione, Steven C. Pennings, Katharine N. Suding, Incorporating clonal growth form clarifies the role of plant height in response to nitrogen addition, Oecologia, 10.1007/s00442-012-2264-5, 169, 4, (1053-1062), (2012).
- Gabriel Yedid, Lise Heier, Effects of Random and Selective Mass Extinction on Community Composition in Communities of Digital Organisms, Evolutionary Biology: Mechanisms and Trends, 10.1007/978-3-642-30425-5, (43-64), (2012).
- Jarrod D. Blue, Lara Souza, Aimée T. Classen, Jennifer A. Schweitzer, Nathan J. Sanders, The variable effects of soil nitrogen availability and insect herbivory on aboveground and belowground plant biomass in an old-field ecosystem, Oecologia, 10.1007/s00442-011-2028-7, 167, 3, (771-780), (2011).
- Jan Mládek, Michal Hejcman, Stanislav Hejduk, Martin Duchoslav, Vilém Pavlů, Community Seasonal Development Enables Late Defoliation Without Loss of Forage Quality in Semi-natural Grasslands, Folia Geobotanica, 10.1007/s12224-010-9083-4, 46, 1, (17-34), (2010).
- Anne E. Magurran, Stephen R. Baillie, Stephen T. Buckland, Jan McP. Dick, David A. Elston, E. Marian Scott, Rognvald I. Smith, Paul J. Somerfield, Allan D. Watt, Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time, Trends in Ecology & Evolution, 10.1016/j.tree.2010.06.016, 25, 10, (574-582), (2010).
- Anne E. Magurran, Peter A. Henderson, Temporal turnover and the maintenance of diversity in ecological assemblages, Philosophical Transactions of the Royal Society B: Biological Sciences, 10.1098/rstb.2010.0285, 365, 1558, (3611-3620), (2010).
- Melinda D. Smith, Alan K. Knapp, Scott L. Collins, A framework for assessing ecosystem dynamics in response to chronic resource alterations induced by global change, Ecology, 10.1890/08-1815.1, 90, 12, (3279-3289), (2009).





