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Volume 97, Issue 3
Statistical Reports

Estimating where and how animals travel: an optimal framework for path reconstruction from autocorrelated tracking data

C. H. Fleming

Corresponding Author

Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Rd., Front Royal, Virginia, 22630 USA

Department of Biology, University of Maryland College Park, College Park, Maryland, 20742 USA

E‐mail: emingC@si.edu, hfleming@umd.eduSearch for more papers by this author
W. F. Fagan

Department of Biology, University of Maryland College Park, College Park, Maryland, 20742 USA

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T. Mueller

Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Rd., Front Royal, Virginia, 22630 USA

Department of Biology, University of Maryland College Park, College Park, Maryland, 20742 USA

Biodiversity and Climate Research Centre, Senckenberg Gesellschaft fuer Naturforschung, Senckenberganlage 25, 60325 Frankfurt, Germany

Department of Biological Sciences, Goethe University Frankfurt, Max‐von‐Laue‐Straße 9, 60438 Frankfurt, Germany

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K. A. Olson

Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Rd., Front Royal, Virginia, 22630 USA

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P. Leimgruber

Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Rd., Front Royal, Virginia, 22630 USA

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J. M. Calabrese

Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Rd., Front Royal, Virginia, 22630 USA

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First published: 28 March 2016
Citations: 13

Corresponding Editor: N. J. Gotelli.

Abstract

An animal's trajectory is a fundamental object of interest in movement ecology, as it directly informs a range of topics from resource selection to energy expenditure and behavioral states. Optimally inferring the mostly unobserved movement path and its dynamics from a limited sample of telemetry observations is a key unsolved problem, however. The field of geostatistics has focused significant attention on a mathematically analogous problem that has a statistically optimal solution coined after its inventor, Krige. Kriging revolutionized geostatistics and is now the gold standard for interpolating between a limited number of autocorrelated spatial point observations. Here we translate Kriging for use with animal movement data. Our Kriging formalism encompasses previous methods to estimate animal's trajectories—the Brownian bridge and continuous‐time correlated random walk library—as special cases, informs users as to when these previous methods are appropriate, and provides a more general method when they are not. We demonstrate the capabilities of Kriging on a case study with Mongolian gazelles where, compared to the Brownian bridge, Kriging with a more optimal model was 10% more precise in interpolating locations and 500% more precise in estimating occurrence areas.

Number of times cited according to CrossRef: 13

  • The challenges of estimating the distribution of flight heights from telemetry or altimetry data, Animal Biotelemetry, 10.1186/s40317-020-00194-z, 8, 1, (2020).
  • A comprehensive analysis of autocorrelation and bias in home range estimation, Ecological Monographs, 10.1002/ecm.1344, 89, 2, (2019).
  • The time frame of home‐range studies: from function to utilization, Biological Reviews, 10.1111/brv.12545, 94, 6, (1974-1982), (2019).
  • The Langevin diffusion as a continuous‐time model of animal movement and habitat selection, Methods in Ecology and Evolution, 10.1111/2041-210X.13275, 10, 11, (1894-1907), (2019).
  • Estimating interactions between individuals from concurrent animal movements, Methods in Ecology and Evolution, 10.1111/2041-210X.13235, 10, 8, (1234-1245), (2019).
  • Correcting for missing and irregular data in home‐range estimation, Ecological Applications, 10.1002/eap.1704, 28, 4, (1003-1010), (2018).
  • Can AI predict animal movements? Filling gaps in animal trajectories using inverse reinforcement learning, Ecosphere, 10.1002/ecs2.2447, 9, 10, (2018).
  • Kálmán filters for continuous-time movement models, Ecological Informatics, 10.1016/j.ecoinf.2017.04.008, 40, (8-21), (2017).
  • Bridging the gaps in animal movement: hidden behaviors and ecological relationships revealed by integrated data streams, Ecosphere, 10.1002/ecs2.1751, 8, 3, (2017).
  • Imputation Approaches for Animal Movement Modeling, Journal of Agricultural, Biological and Environmental Statistics, 10.1007/s13253-017-0294-5, 22, 3, (335-352), (2017).
  • Estimating utilization distributions from fitted step‐selection functions, Ecosphere, 10.1002/ecs2.1771, 8, 4, (2017).
  • Estimation of baboon daily travel distances by means of point sampling – the magnitude of underestimation, Primate Biology, 10.5194/pb-4-143-2017, 4, 2, (143-151), (2017).
  • ctmm: an r package for analyzing animal relocation data as a continuous‐time stochastic process, Methods in Ecology and Evolution, 10.1111/2041-210X.12559, 7, 9, (1124-1132), (2016).